X-Git-Url: https://code.communitydata.science/cdsc_reddit.git/blobdiff_plain/4447c60265c5c5de3281ca135461d91ab5339f03..6baa08889b2f46c14f2baa5e3d2136cf165b1673:/author_cosine_similarity.py diff --git a/author_cosine_similarity.py b/author_cosine_similarity.py index 7b2a766..7137da4 100644 --- a/author_cosine_similarity.py +++ b/author_cosine_similarity.py @@ -13,7 +13,7 @@ spark = SparkSession.builder.getOrCreate() conf = spark.sparkContext.getConf() # outfile = '/gscratch/comdata/users/nathante/test_similarities_500.feather'; min_df = None; included_subreddits=None; similarity_threshold=0; -def author_cosine_similarities(outfile, min_df = None, included_subreddits=None, similarity_threshold=0, topN=500, exclude_phrases=True): +def author_cosine_similarities(outfile, min_df = None, included_subreddits=None, similarity_threshold=0, topN=500): ''' Compute similarities between subreddits based on tfi-idf vectors of author comments @@ -32,9 +32,8 @@ https://stanford.edu/~rezab/papers/dimsum.pdf. If similarity_threshold=0 we get ''' print(outfile) - print(exclude_phrases) - tfidf = spark.read.parquet('/gscratch/comdata/users/nathante/subreddit_tfidf_authors.parquet_test1/part-00000-107cee94-92d8-4265-b804-40f1e7f1aaf2-c000.snappy.parquet') + tfidf = spark.read.parquet('/gscratch/comdata/users/nathante/subreddit_tfidf_authors.parquet') if included_subreddits is None: included_subreddits = list(islice(open("/gscratch/comdata/users/nathante/cdsc-reddit/top_25000_subs_by_comments.txt"),topN)) @@ -55,12 +54,14 @@ https://stanford.edu/~rezab/papers/dimsum.pdf. If similarity_threshold=0 we get sim_dist = sim_dist.repartition(1) sim_dist.write.parquet(str(output_parquet),mode='overwrite',compression='snappy') - spark.stop() + #instead of toLocalMatrix() why not read as entries and put strait into numpy sim_entries = pd.read_parquet(output_parquet) df = tfidf.select('subreddit','subreddit_id_new').distinct().toPandas() + + spark.stop() df['subreddit_id_new'] = df['subreddit_id_new'] - 1 df = df.sort_values('subreddit_id_new').reset_index(drop=True) df = df.set_index('subreddit_id_new') @@ -75,4 +76,4 @@ https://stanford.edu/~rezab/papers/dimsum.pdf. If similarity_threshold=0 we get return similarities if __name__ == '__main__': - fire.Fire(term_cosine_similarities) + fire.Fire(author_cosine_similarities)