From: Nate E TeBlunthuis <nathante@n2232.hyak.local>
Date: Thu, 22 Apr 2021 17:37:04 +0000 (-0700)
Subject: bugfix in weekly similarities
X-Git-Url: https://code.communitydata.science/cdsc_reddit.git/commitdiff_plain/003a48aea50bb3f0b19bc688648ef1bb88e36fe9

bugfix in weekly similarities
---

diff --git a/similarities/weekly_cosine_similarities.py b/similarities/weekly_cosine_similarities.py
index f9c9666..044ee75 100644
--- a/similarities/weekly_cosine_similarities.py
+++ b/similarities/weekly_cosine_similarities.py
@@ -8,7 +8,7 @@ import fire
 from itertools import islice
 from pathlib import Path
 from similarities_helper import *
-from multiprocessing import pool
+from multiprocessing import Pool, cpu_count
 
 def _week_similarities(tempdir, term_colname, week):
         print(f"loading matrix: {week}")
@@ -40,7 +40,7 @@ def cosine_similarities_weekly(tfidf_path, outfile, term_colname, min_df = None,
     print(f"computing weekly similarities for {len(included_subreddits)} subreddits")
 
     print("creating temporary parquet with matrix indicies")
-    tempdir = prep_tfidf_entries_weekly(tfidf, term_colname, min_df, included_subreddits)
+    tempdir = prep_tfidf_entries_weekly(tfidf, term_colname, min_df, max_df=None, included_subreddits=included_subreddits)
 
     tfidf = spark.read.parquet(tempdir.name)
 
@@ -57,11 +57,11 @@ def cosine_similarities_weekly(tfidf_path, outfile, term_colname, min_df = None,
     def week_similarities_helper(week):
         _week_similarities(tempdir, term_colname, week)
 
-    with Pool(40) as pool: # maybe it can be done with 40 cores on the huge machine?
-        list(pool.map(weeks,week_similarities_helper))
+    with Pool(cpu_count()) as pool: # maybe it can be done with 40 cores on the huge machine?
+        list(pool.map(week_similarities_helper,weeks))
 
 def author_cosine_similarities_weekly(outfile, min_df=2 , included_subreddits=None, topN=500):
-    return cosine_similarities_weekly('/gscratch/comdata/output/reddit_similarity/tfidf_weekly/comment_authors_100k.parquet',
+    return cosine_similarities_weekly('/gscratch/comdata/output/reddit_similarity/tfidf_weekly/comment_authors.parquet',
                                       outfile,
                                       'author',
                                       min_df,
@@ -69,7 +69,7 @@ def author_cosine_similarities_weekly(outfile, min_df=2 , included_subreddits=No
                                       topN)
 
 def term_cosine_similarities_weekly(outfile, min_df=None, included_subreddits=None, topN=500):
-    return cosine_similarities_weekly('/gscratch/comdata/output/reddit_similarity/tfidf_weekly/comment_terms_100k.parquet',
+    return cosine_similarities_weekly('/gscratch/comdata/output/reddit_similarity/tfidf_weekly/comment_terms.parquet',
                                       outfile,
                                       'term',
                                       min_df,