X-Git-Url: https://code.communitydata.science/ml_measurement_error_public.git/blobdiff_plain/3d1964b806106d76f13301f0cf6dccf35cd7d66c..82fe7b0f482a71c95e8ae99f7e6d37b79357506a:/simulations/Makefile diff --git a/simulations/Makefile b/simulations/Makefile index b3ab77a..e595811 100644 --- a/simulations/Makefile +++ b/simulations/Makefile @@ -120,12 +120,10 @@ remember_irr.RDS: example_5.feather plot_irr_example.R plot_irr_dv_example.R sum # sbatch --wait --verbose run_job.sbatch Rscript plot_irr_dv_example.R --infile example_6.feather --name "plot.df.example.6" - robustness_1_jobs: 02_indep_differential.R simulation_base.R grid_sweep.py sbatch --wait --verbose run_job.sbatch grid_sweep.py --command "Rscript 02_indep_differential.R" --arg_dict '{"N":${Ns},"m":${ms}, "seed":${seeds}, "outfile":["robustness_1.feather"],"y_explained_variance":${explained_variances}, "Bzy":[-0.3],"Bxy":[0.3],"Bzx":[0.3], "outcome_formula":["y~x+z"], "proxy_formula":["w_pred~y+x"], "truth_formula":["x~1"]}' --outfile robustness_1_jobs - robustness_1.feather: robustness_1_jobs rm -f robustness_1.feather sbatch --wait --verbose --array=1-$(shell cat robustness_1_jobs | wc -l) run_simulation.sbatch 0 robustness_1_jobs