X-Git-Url: https://code.communitydata.science/ml_measurement_error_public.git/blobdiff_plain/8ac33c14d7e7874bf283aa9c252fa06566dc8b15..d8bc08f18f8c2128369ee959196e0e6080a11689:/simulations/simulation_base.R

diff --git a/simulations/simulation_base.R b/simulations/simulation_base.R
index 82b17a7..08b11ec 100644
--- a/simulations/simulation_base.R
+++ b/simulations/simulation_base.R
@@ -151,10 +151,10 @@ run_simulation_depvar <- function(df, result, outcome_formula=y~x+z, proxy_formu
     temp.df <- copy(df)
     temp.df[,y:=y.obs]
     mod.caroll.lik <- measerr_mle_dv(temp.df, outcome_formula=outcome_formula, proxy_formula=proxy_formula)
-    fisher.info <- solve(mod.caroll.lik$hessian)
+    fischer.info <- solve(mod.caroll.lik$hessian)
     coef <- mod.caroll.lik$par
-    ci.upper <- coef + sqrt(diag(fisher.info)) * 1.96
-    ci.lower <- coef - sqrt(diag(fisher.info)) * 1.96
+    ci.upper <- coef + sqrt(diag(fischer.info)) * 1.96
+    ci.lower <- coef - sqrt(diag(fischer.info)) * 1.96
     result <- append(result,
                      list(Bxy.est.mle = coef['x'],
                           Bxy.ci.upper.mle = ci.upper['x'],
@@ -299,11 +299,32 @@ run_simulation <-  function(df, result, outcome_formula=y~x+z, proxy_formula=NUL
         temp.df <- copy(df)
         temp.df <- temp.df[,x:=x.obs]
         mod.caroll.lik <- measerr_mle(temp.df, outcome_formula=outcome_formula, proxy_formula=proxy_formula, truth_formula=truth_formula)
-        fisher.info <- solve(mod.caroll.lik$hessian)
-        coef <- mod.caroll.lik$par
-        ci.upper <- coef + sqrt(diag(fisher.info)) * 1.96
-        ci.lower <- coef - sqrt(diag(fisher.info)) * 1.96
-        
+
+    ## tryCatch({
+    ## mod.calibrated.mle <- mecor(y ~ MeasError(w_pred, reference = x.obs) + z, df, B=400, method='efficient')
+    ## (mod.calibrated.mle)
+    ## (mecor.ci <- summary(mod.calibrated.mle)$c$ci['x.obs',])
+    ## result <- append(result, list(
+    ##                              Bxy.est.mecor = mecor.ci['Estimate'],
+    ##                              Bxy.ci.upper.mecor = mecor.ci['UCI'],
+    ##                              Bxy.ci.lower.mecor = mecor.ci['LCI'])
+    ##                  )
+
+
+
+    fischer.info <- NA
+    ci.upper <- NA
+    ci.lower <- NA
+
+    tryCatch({fischer.info <- solve(mod.caroll.lik$hessian)
+        ci.upper <- coef + sqrt(diag(fischer.info)) * 1.96
+        ci.lower <- coef - sqrt(diag(fischer.info)) * 1.96
+    },
+
+    error=function(e) {result[['error']] <- as.character(e)
+    })
+
+    coef <- mod.caroll.lik$par
         
         result <- append(result,
                          list(Bxy.est.mle = coef['x'],