Merge branch 'master' into regex_scanner

[mediawiki_dump_tools.git] / wikiq

diff --git a/wikiq b/wikiq
index a6f079eff7e3c80d04b251949eef8269d3e837ae..b982eaa5f0a8bc32dd7f5dcae77941339ad38304 100755 (executable)
--- a/wikiq
+++ b/wikiq
@@ -3,7 +3,7 @@
 # original wikiq headers are: title articleid revid date_time anon
 # editor editor_id minor text_size text_entropy text_md5 reversion
 # additions_size deletions_size
 # original wikiq headers are: title articleid revid date_time anon
 # editor editor_id minor text_size text_entropy text_md5 reversion
 # additions_size deletions_size

-import pdb
+

 import argparse
 import sys
 import os, os.path
 import argparse
 import sys
 import os, os.path


@@ -34,6 +34,29 @@ def calculate_persistence(tokens_added):
     return(sum([(len(x.revisions)-1) for x in tokens_added]),
            len(tokens_added))
 
     return(sum([(len(x.revisions)-1) for x in tokens_added]),
            len(tokens_added))
 

+def matchmaker(rev_data, regular_expression, scanner, rev): #rev_data,self.regex,self.scanner, rev
+    for location in scanner: #presumably 'comment' 'text' 'comment text' made into a list by args
+        if location == "comment":
+            matching_string = rev.comment
+        elif location == "text":
+            matching_string = rev.text
+        else:
+            sys.exit("regex scanner location must be 'comment' or 'text'.")
+
+        if (re.search(regular_expression, matching_string) is not None): # we know that there is a match somewhere
+            m = re.finditer(regular_expression, matching_string) # all our matchObjects in a list
+            blob=""
+            for result in m:
+                blob = blob + "," + result.group(0)
+            # columns we want
+            rev_data['matches'] = blob #### the list of matchObjects. gleaned in post-processing       
+        else:
+            rev_data['matches'] = None
+       
+    return rev_data
+
+
+

 class WikiqIterator():
     def __init__(self, fh, collapse_user=False):
         self.fh = fh
 class WikiqIterator():
     def __init__(self, fh, collapse_user=False):
         self.fh = fh


@@ -128,7 +151,7 @@ class WikiqPage():
 
 class WikiqParser():
     
 
 class WikiqParser():
     

-    def __init__(self, input_file, output_file, collapse_user=False, persist=None, urlencode=False, namespaces = None):
+    def __init__(self, input_file, output_file, scanner, match_regex, collapse_user=False, persist=None, urlencode=False, namespaces = None):

         """ 
         Parameters:
            persist : what persistence method to use. Takes a PersistMethod value
         """ 
         Parameters:
            persist : what persistence method to use. Takes a PersistMethod value


@@ -141,6 +164,9 @@ class WikiqParser():
         self.printed_header = False
         self.namespaces = []
         self.urlencode = urlencode
         self.printed_header = False
         self.namespaces = []
         self.urlencode = urlencode

+        self.scanner = scanner
+        self.match_regex = match_regex
+

         if namespaces is not None:
             self.namespace_filter = set(namespaces)
         else:
         if namespaces is not None:
             self.namespace_filter = set(namespaces)
         else:


@@ -161,6 +187,7 @@ class WikiqParser():
         # if we've made it this far with no matches, we return the default namespace
         return default_ns
 
         # if we've made it this far with no matches, we return the default namespace
         return default_ns
 

+

     def process(self):
 
         # create a regex that creates the output filename
     def process(self):
 
         # create a regex that creates the output filename


@@ -184,7 +211,7 @@ class WikiqParser():
 
             # skip namespaces not in the filter
             if self.namespace_filter is not None:
 
             # skip namespaces not in the filter
             if self.namespace_filter is not None:

-                if namespace in self.namespace_filter:
+                if namespace not in self.namespace_filter:

                     continue
 
             rev_detector = mwreverts.Detector()
                     continue
 
             rev_detector = mwreverts.Detector()


@@ -205,18 +232,32 @@ class WikiqParser():
                     from mw.lib import persistence
                     state = persistence.State()
 
                     from mw.lib import persistence
                     state = persistence.State()
 

-                
-

             # Iterate through a page's revisions
             for rev in page:
             # Iterate through a page's revisions
             for rev in page:

-
-                rev_data = {'revid' : rev.id,
-                            'date_time' : rev.timestamp.strftime('%Y-%m-%d %H:%M:%S'),
-                            'articleid' : page.id,
-                            'editor_id' : "" if rev.deleted.user == True or rev.user.id is None else rev.user.id,
-                            'title' : '"' + page.title + '"',
-                            'namespace' : namespace,
-                            'deleted' : "TRUE" if rev.deleted.text else "FALSE" } 
+                ## m = re.finditer() #so we can find all instances
+                ## m.groupdict() #so we can look at them all with their names
+
+                # initialize rev_dat
+                rev_data = {}
+
+                if self.scanner is not None: # we know we want to do a regex search 
+                    ## comment = want to look in comment attached to revision
+                    ## text = want to look in revision text
+
+                    ### call the scanner function
+                    rev_data = matchmaker(rev_data, self.match_regex, self.scanner, rev)
+       
+                if self.scanner is not None and rev_data['matches'] is None:
+                    next
+
+                # we fill out the rest of the data structure now
+                rev_data['revid'] = rev.id
+                rev_data['date_time'] = rev.timestamp.strftime('%Y-%m-%d %H:%M:%S')
+                rev_data['articleid'] = page.id
+                rev_data['editor_id'] = "" if rev.deleted.user == True or rev.user.id is None else rev.user.id
+                rev_data['title'] = '"' + page.title + '"'
+                rev_data['namespace'] = namespace
+                rev_data['deleted'] = "TRUE" if rev.deleted.text else "FALSE"

 
                 # if revisions are deleted, /many/ things will be missing
                 if rev.deleted.text:
 
                 # if revisions are deleted, /many/ things will be missing
                 if rev.deleted.text:


@@ -241,7 +282,7 @@ class WikiqParser():
 
                     # TODO rev.bytes doesn't work.. looks like a bug
                     rev_data['text_chars'] = len(rev.text)
 
                     # TODO rev.bytes doesn't work.. looks like a bug
                     rev_data['text_chars'] = len(rev.text)

-               
+

                     # generate revert data
                     revert = rev_detector.process(text_sha1, rev.id)
                     
                     # generate revert data
                     revert = rev_detector.process(text_sha1, rev.id)
                     


@@ -381,14 +422,19 @@ parser.add_argument('--collapse-user', dest="collapse_user", action="store_true"
                     help="Operate only on the final revision made by user a user within all sequences of consecutive edits made by a user. This can be useful for addressing issues with text persistence measures.")
 
 parser.add_argument('-p', '--persistence', dest="persist", default=None, const='', type=str, choices = ['','segment','sequence','legacy'], nargs='?',
                     help="Operate only on the final revision made by user a user within all sequences of consecutive edits made by a user. This can be useful for addressing issues with text persistence measures.")
 
 parser.add_argument('-p', '--persistence', dest="persist", default=None, const='', type=str, choices = ['','segment','sequence','legacy'], nargs='?',

-                    help="Compute and report measures of content persistent: (1) persistent token revisions, (2) tokens added, and (3) number of revision used in computing the first measure. This may by slow.  Use -p=segment for advanced persistence calculation method that is robust to content moves. This might be very slow. Use -p=legacy for legacy behavior.")
+                    help="Compute and report measures of content persistent: (1) persistent token revisions, (2) tokens added, and (3) number of revision used in computing the first measure. This may by slow.  The defualt is -p=sequence, which uses the same algorithm as in the past, but with improvements to wikitext parsing. Use -p=legacy for old behavior used in older research projects. Use -p=segment for advanced persistence calculation method that is robust to content moves, but prone to bugs, and slower.")

 
 parser.add_argument('-u', '--url-encode', dest="urlencode", action="store_true",
                     help="Output url encoded text strings. This works around some data issues like newlines in editor names. In the future it may be used to output other text data.")
 
 parser.add_argument('-n', '--namespace-include', dest="namespace_filter", type=int, action='append',
 
 parser.add_argument('-u', '--url-encode', dest="urlencode", action="store_true",
                     help="Output url encoded text strings. This works around some data issues like newlines in editor names. In the future it may be used to output other text data.")
 
 parser.add_argument('-n', '--namespace-include', dest="namespace_filter", type=int, action='append',

-                    help="Id number of namspace to include.")
+                    help="Id number of namspace to include. Can be specified more than once.")
+
+parser.add_argument('-rs', '--regex-scanner', dest="scanner",type=str, action='append',
+                    help="Find the regex match specified by -R/--match searching in: (1) comment (2) text.")

 
 

+parser.add_argument('-R', '--match', dest="match_regex", type=str, 
+                    help="The regular expression you would like to find in the string and put in capture group")

 
 args = parser.parse_args()
 
 
 args = parser.parse_args()
 


@@ -404,7 +450,7 @@ else:
     persist = PersistMethod.sequence
 
 if args.namespace_filter is not None:
     persist = PersistMethod.sequence
 
 if args.namespace_filter is not None:

-    namespaces = [int(ns) for ns in args.namespace_filter.split(',')]
+    namespaces = args.namespace_filter

 else:
     namespaces = None
 
 else:
     namespaces = None
 


@@ -426,12 +472,13 @@ if len(args.dumpfiles) > 0:
             filename = os.path.join(output_dir, os.path.basename(filename))
             output_file = open_output_file(filename)
 
             filename = os.path.join(output_dir, os.path.basename(filename))
             output_file = open_output_file(filename)
 

-            wikiq = WikiqParser(input_file, output_file, 
-                                collapse_user=args.collapse_user,
-                                persist=persist,
-                                urlencode=args.urlencode,
-                                namespaces = namespaces)
-
+        wikiq = WikiqParser(input_file, output_file, 
+                            collapse_user=args.collapse_user,
+                            persist=persist,
+                            urlencode=args.urlencode,
+                            namespaces = namespaces,
+                            match_regex=args.match_regex, # adding in the new 2 args for regex searching
+                            scanner=args.scanner)

 
         wikiq.process()
 
 
         wikiq.process()
 


@@ -442,8 +489,11 @@ else:
     wikiq = WikiqParser(sys.stdin, sys.stdout,
                         collapse_user=args.collapse_user,
                         persist=persist,
     wikiq = WikiqParser(sys.stdin, sys.stdout,
                         collapse_user=args.collapse_user,
                         persist=persist,

-                        persist_legacy=args.persist_legacy,
-                        urlencode=args.urlencode)
+                        #persist_legacy=args.persist_legacy,
+                        urlencode=args.urlencode,
+                        namespaces = namespaces,
+                        match_regex=args.match_regex, # adding in the new 2 args for regex searching
+                        scanner=args.scanner)

     wikiq.process()
 
 # stop_words = "a,able,about,across,after,all,almost,also,am,among,an,and,any,are,as,at,be,because,been,but,by,can,cannot,could,dear,did,do,does,either,else,ever,every,for,from,get,got,had,has,have,he,her,hers,him,his,how,however,i,if,in,into,is,it,its,just,least,let,like,likely,may,me,might,most,must,my,neither,no,nor,not,of,off,often,on,only,or,other,our,own,rather,said,say,says,she,should,since,so,some,than,that,the,their,them,then,there,these,they,this,tis,to,too,twas,us,wants,was,we,were,what,when,where,which,while,who,whom,why,will,with,would,yet,you,your"
     wikiq.process()
 
 # stop_words = "a,able,about,across,after,all,almost,also,am,among,an,and,any,are,as,at,be,because,been,but,by,can,cannot,could,dear,did,do,does,either,else,ever,every,for,from,get,got,had,has,have,he,her,hers,him,his,how,however,i,if,in,into,is,it,its,just,least,let,like,likely,may,me,might,most,must,my,neither,no,nor,not,of,off,often,on,only,or,other,our,own,rather,said,say,says,she,should,since,so,some,than,that,the,their,them,then,there,these,they,this,tis,to,too,twas,us,wants,was,we,were,what,when,where,which,while,who,whom,why,will,with,would,yet,you,your"