Merge branch 'master' of github.com:CommunityDataScienceCollective/COVID-19_Digital_O...

diff --git a/.gitignore b/.gitignore
new file mode 100644 (file)
index 0000000..cca401a
--- /dev/null
+++ b/.gitignore
@@ -0,0 +1 @@
+wikipedia/data/

diff --git a/cron-wikipedia_revisions.sh b/cron-wikipedia_revisions.sh
new file mode 100644 (file)
index 0000000..a53bc3f
--- /dev/null
+++ b/cron-wikipedia_revisions.sh
@@ -0,0 +1,17 @@
+#!/bin/bash -x
+
+TZ="UTC"
+date_string=$(date +%Y%m%d)
+
+./wikipedia/scripts/wikiproject_scraper.py 2> >(tee wikipedia/logs/enwp-wikiproject_scraper-${date_string}.log)
+
+revs_log="enwp-revisions-${date_string}.log"
+./wikipedia/scripts/fetch_enwiki_revisions.py 2> >(tee wikipedia/logs/${rev_log})
+mv wikipedia/logs/${revs_log} /var/www/covid19/wikipedia/logs/
+
+revs_tsv="digobs_covid19-wikipedia-enwiki_revisions-${date_string}.tsv"
+mv wikipedia/data/${revs_tsv} /var/www/covid19/wikipedia
+
+revs_json="digobs_covid19-wikipedia-enwiki_revisions-${date_string}.json"
+xz wikipedia/data/${revs_json}
+mv wikipedia/data/${revs_json}.xz /var/www/covid19/wikipedia

diff --git a/cron-wikipedia_views.sh b/cron-wikipedia_views.sh
new file mode 100644 (file)
index 0000000..3611657
--- /dev/null
+++ b/cron-wikipedia_views.sh
@@ -0,0 +1,16 @@
+#!/bin/bash -x
+
+TZ="UTC"
+date_string=$(date +%Y%m%d)
+
+./wikipedia/scripts/wikiproject_scraper.py 2> >(tee wikipedia/logs/enwp-wikiproject_scraper-${date_string}.log)
+
+# get the list of files
+view_log="enwp-daily_views-${date_string}.log"
+./wikipedia/scripts/fetch_enwiki_daily_views.py 2> >(tee wikipedia/logs/${view_log})
+mv wikipedia/logs/${view_log} /var/www/covid19/wikipedia/logs/${view_log}
+mv wikipedia/data/digobs_covid19-wikipedia-enwiki_dailyviews-${date_string}.tsv /var/www/covid19/wikipedia/
+
+# xz wikipedia/data/digobs_covid19-wikipedia-enwiki_dailyviews-${date_string}.json
+mv wikipedia/data/digobs_covid19-wikipedia-enwiki_dailyviews-${date_string}.json /var/www/covid19/wikipedia/
+

diff --git a/wikipedia_views/analysis/output/top10_views_by_project_date.csv b/wikipedia/analysis/output/top10_views_by_project_date.csv
similarity index 100%
rename from wikipedia_views/analysis/output/top10_views_by_project_date.csv
rename to wikipedia/analysis/output/top10_views_by_project_date.csv

diff --git a/wikipedia_views/analysis/pageview_example.R b/wikipedia/analysis/pageview_example.R
similarity index 100%
rename from wikipedia_views/analysis/pageview_example.R
rename to wikipedia/analysis/pageview_example.R

diff --git a/wikipedia_views/logs/placeholder b/wikipedia/logs/placeholder
similarity index 100%
rename from wikipedia_views/logs/placeholder
rename to wikipedia/logs/placeholder

diff --git a/wikipedia_views/resources/articles.txt b/wikipedia/resources/enwp_wikiproject_covid19_articles.txt
similarity index 86%
rename from wikipedia_views/resources/articles.txt
rename to wikipedia/resources/enwp_wikiproject_covid19_articles.txt
index 566df1507c81adfb58518999efc22ad2cae27552..1df2567dcbf4a2671c2fbe9bbc187b06f1789bdd 100644 (file)
--- a/wikipedia_views/resources/articles.txt
+++ b/wikipedia/resources/enwp_wikiproject_covid19_articles.txt
@@ -1,11 +1,11 @@
-Article
 2019–20 coronavirus pandemic
 Severe acute respiratory syndrome coronavirus 2
 Social distancing
 Contact tracing
-Timeline of the 2019–20 coronavirus pandemic
-2020 stock market crash
-Impact of the 2019–20 coronavirus pandemic on cinema
+2019–20 coronavirus pandemic by country and territory
+2020 coronavirus pandemic in Asia
+Acute respiratory distress syndrome
+Michael Sorkin
 2019–20 coronavirus pandemic in mainland China
 2020 coronavirus pandemic in Europe
 2020 coronavirus pandemic in Italy
@@ -15,75 +15,84 @@ COVID-19 testing
 Chloroquine
 Grand Princess
 Impact of the 2019–20 coronavirus pandemic on politics
+Mike Longo
 Tedros Adhanom
-Bruce Aylward
-Remdesivir
+2020 coronavirus pandemic in Africa
 Angiotensin-converting enzyme 2
+Liang Wudong
+Risk factor
+Angelo Rottoli
+Patrick Devedjian
 Case chronology of the 2019–20 coronavirus pandemic in March 2020
-List of events affected by the 2019–20 coronavirus pandemic
-Timeline of the 2019–20 coronavirus pandemic in March 2020
+List of deaths from the 2019–20 coronavirus pandemic
+Timeline of the 2019–20 coronavirus pandemic from November 2019 to January 2020
+Timeline of the 2019–20 coronavirus pandemic in February 2020
 2020 coronavirus pandemic in Canada
-2020 coronavirus pandemic in the United States
-2020 coronavirus pandemic in Australia
-2020 coronavirus pandemic in Belgium
-2020 coronavirus pandemic in Bulgaria
-2020 coronavirus pandemic in Croatia
-2020 coronavirus pandemic in Finland
-2020 coronavirus pandemic in Germany
-2020 coronavirus pandemic in Hungary
-2020 coronavirus pandemic in Israel
-2020 coronavirus pandemic in Latvia
-2020 coronavirus pandemic in New York (state)
-2020 coronavirus pandemic in Poland
-2020 coronavirus pandemic in Romania
-2020 coronavirus pandemic in Slovakia
-2020 coronavirus pandemic in Sweden
-2020 coronavirus pandemic in Taiwan
-2020 coronavirus pandemic in Venezuela
-2020 coronavirus pandemic in the Netherlands
-2020 coronavirus pandemic in the Republic of Ireland
+2020 coronavirus pandemic in India
+2019–20 coronavirus pandemic in Hubei
+2020 coronavirus pandemic in Azerbaijan
+2020 coronavirus pandemic in Bosnia and Herzegovina
+2020 coronavirus pandemic in California
+2020 coronavirus pandemic in Egypt
+2020 coronavirus pandemic in France
+2020 coronavirus pandemic in Greece
+2020 coronavirus pandemic in Illinois
+2020 coronavirus pandemic in Japan
+2020 coronavirus pandemic in Malta
+2020 coronavirus pandemic in Norway
+2020 coronavirus pandemic in Portugal
+2020 coronavirus pandemic in Russia
+2020 coronavirus pandemic in Spain
+2020 coronavirus pandemic in Switzerland
+2020 coronavirus pandemic in Turkey
+2020 coronavirus pandemic in the Czech Republic
+2020 coronavirus pandemic in the Philippines
+2020 coronavirus pandemic in the United Kingdom
 Centers for Disease Control and Prevention
 Coronavirus party
 Extracorporeal membrane oxygenation
 Financial impact of the 2019–20 coronavirus pandemic
 Impact of the 2019–20 coronavirus pandemic on prisons
 Impact of the 2019–20 coronavirus pandemic on the 2020 Summer Olympics
-Li Wenliang
-National Health Commission
-Socio-economic impact of the 2019–20 coronavirus pandemic
-Wuhan Institute of Virology
-2019–20 coronavirus pandemic in Sichuan
-2020 India coronavirus lockdown
+Impact of the 2019–20 coronavirus pandemic on the video game industry
+NHS Nightingale Hospitals
+Severe acute respiratory syndrome
+U.S. state and local government response to the 2020 coronavirus pandemic
+2019–20 coronavirus pandemic in Henan
+2020 coronavirus lockdown in India
 2020 coronavirus pandemic in Andorra
 2020 coronavirus pandemic in Belarus
 2020 coronavirus pandemic in Iceland
 2020 coronavirus pandemic in Kosovo
 2020 coronavirus pandemic in Lithuania
-2020 coronavirus pandemic in Manitoba
-2020 coronavirus pandemic in Monaco
+2020 coronavirus pandemic in Moldova
+2020 coronavirus pandemic in Myanmar
 2020 coronavirus pandemic in North Macedonia
 2020 coronavirus pandemic in Slovenia
-2020 coronavirus pandemic in Uganda
-2020 coronavirus pandemic in Vatican City
+2020 coronavirus pandemic in Transnistria
+2020 coronavirus pandemic in Ukraine
+2020 coronavirus pandemic in the Falkland Islands
 Case fatality rate
 Coronavirus Aid, Relief, and Economic Security Act
 Darvinson Rojas
-Let's Dance 2020
-Media coverage of the 2019–20 coronavirus pandemic
-Stay-at-home order
-Draft:Coronavirus in Zimbabwe
-2020 coronavirus pandemic in French Polynesia
-2020 coronavirus pandemic in Transnistria
+Gaetano Manfredi
+Jenny Polanco
+Lopinavir/ritonavir
+Mental health during the 2019–20 coronavirus pandemic
+Spit hood
+Zhong Nanshan
+2020 coronavirus pandemic in Belize
+2020 coronavirus pandemic in Mozambique
 Chen Wei (medical scientist)
+Imperial College COVID-19 Response Team
 Panic buying
-River of Grace Community Church
-Evacuations related to the 2019–20 coronavirus pandemic
-List of SARS outbreaks
-Novel coronavirus
+Curfews and lockdowns related to the 2019–20 coronavirus pandemic
+Impact of the 2019–20 coronavirus pandemic on science and technology
+List of incidents of xenophobia and racism related to the 2019–20 coronavirus pandemic
+Joe Diffie
 2020 Malaysia movement control order
 2020 coronavirus pandemic in Guernsey
-2020 coronavirus pandemic in Portland, Oregon
-Anthony Fauci
+2020 coronavirus pandemic on cruise ships
 Charles, Prince of Wales
 Eurovision Song Contest 2020
 Larry Kudlow
@@ -92,54 +101,63 @@ Terrence McNally
 Tom Hanks
 2019–20 coronavirus pandemic cases/WHO situation reports
 2019–20 coronavirus pandemic in Shanghai
-2020 coronavirus pandemic in Afghanistan
-2020 coronavirus pandemic in Argentina
-2020 coronavirus pandemic in Balkans
-2020 coronavirus pandemic in Cambodia
-2020 coronavirus pandemic in Colorado
-2020 coronavirus pandemic in Florida
-2020 coronavirus pandemic in Hong Kong
-2020 coronavirus pandemic in Iraq
-2020 coronavirus pandemic in Kerala
-2020 coronavirus pandemic in Malaysia
-2020 coronavirus pandemic in Massachusetts
+2020 Luzon enhanced community quarantine
+2020 coronavirus pandemic in Alberta
+2020 coronavirus pandemic in Arkansas
+2020 coronavirus pandemic in Brazil
+2020 coronavirus pandemic in Chile
+2020 coronavirus pandemic in Costa Rica
+2020 coronavirus pandemic in Georgia (U.S. state)
+2020 coronavirus pandemic in Indonesia
+2020 coronavirus pandemic in Karnataka
+2020 coronavirus pandemic in Louisiana
+2020 coronavirus pandemic in Maryland
+2020 coronavirus pandemic in Metro Manila
 2020 coronavirus pandemic in Michigan
 2020 coronavirus pandemic in Morocco
 2020 coronavirus pandemic in New Jersey
-2020 coronavirus pandemic in Northern Ireland
+2020 coronavirus pandemic in Nonthaburi Province
+2020 coronavirus pandemic in Nova Scotia
 2020 coronavirus pandemic in Ontario
 2020 coronavirus pandemic in Pakistan
 2020 coronavirus pandemic in Quebec
-2020 coronavirus pandemic in South Africa
-2020 coronavirus pandemic in Sri Lanka
+2020 coronavirus pandemic in Singapore
+2020 coronavirus pandemic in South Carolina
+2020 coronavirus pandemic in Tamil Nadu
 2020 coronavirus pandemic in Uruguay
 2020 coronavirus pandemic in Vietnam
 2020 coronavirus pandemic in Washington, D.C.
 2020 coronavirus pandemic in Wisconsin
 2020 coronavirus pandemic in the United Arab Emirates
-Augustin de Romanet de Beaune
-COVID-19 drug repurposing research
-Christian Drosten
+Anthony Fauci
+Ben Carson
+Carmen Deseda
+Coronavirus Preparedness and Response Supplemental Appropriations Act, 2020
 Deborah Birx
 Flybe
 Impact of the 2019–20 coronavirus pandemic on aviation
 Impact of the 2019–20 coronavirus pandemic on religion
 Impact of the 2019–20 coronavirus pandemic on the food industry
+Jesús Gayoso Rey
 Kanika Kapoor
-Liu Fan (nurse)
+Lorena Borjas
 Matthew Pottinger
+Michael J. Ryan (doctor)
 Neil Ferguson (epidemiologist)
-Robert Wilkie
-Sophie Grégoire Trudeau
+Robert R. Redfield
+SARS conspiracy theory
+Steven Mnuchin
 Suspension of the 2019–20 NBA season
 Travel restrictions related to the 2019–20 coronavirus pandemic
 White House Coronavirus Task Force
 World Dream
+Zhang Wenhong
 2020 Tour Championship
 2020 coronavirus pandemic in Alaska
 2020 coronavirus pandemic in Arizona
 2020 coronavirus pandemic in Aruba
-2020 coronavirus pandemic in Bangladesh
+2020 coronavirus pandemic in Bahrain
+2020 coronavirus pandemic in Bolivia
 2020 coronavirus pandemic in British Columbia
 2020 coronavirus pandemic in Burkina Faso
 2020 coronavirus pandemic in Canary Islands
@@ -149,22 +167,23 @@ World Dream
 2020 coronavirus pandemic in Ecuador
 2020 coronavirus pandemic in Eswatini
 2020 coronavirus pandemic in Fiji
-2020 coronavirus pandemic in Guatemala
-2020 coronavirus pandemic in Honduras
-2020 coronavirus pandemic in Indiana
-2020 coronavirus pandemic in Jamaica
-2020 coronavirus pandemic in Jordan
-2020 coronavirus pandemic in Kentucky
-2020 coronavirus pandemic in Kuwait
-2020 coronavirus pandemic in Lebanon
-2020 coronavirus pandemic in Macau
-2020 coronavirus pandemic in Maine
-2020 coronavirus pandemic in Mexico
-2020 coronavirus pandemic in Missouri
-2020 coronavirus pandemic in Montenegro
-2020 coronavirus pandemic in Nevada
-2020 coronavirus pandemic in New Mexico
-2020 coronavirus pandemic in Nicaragua
+2020 coronavirus pandemic in Goa
+2020 coronavirus pandemic in Hawaii
+2020 coronavirus pandemic in Idaho
+2020 coronavirus pandemic in Ivory Coast
+2020 coronavirus pandemic in Jersey
+2020 coronavirus pandemic in Kansas
+2020 coronavirus pandemic in Kenya
+2020 coronavirus pandemic in Kyrgyzstan
+2020 coronavirus pandemic in London
+2020 coronavirus pandemic in Maharashtra
+2020 coronavirus pandemic in Manitoba
+2020 coronavirus pandemic in Mississippi
+2020 coronavirus pandemic in Montana
+2020 coronavirus pandemic in Namibia
+2020 coronavirus pandemic in New Brunswick
+2020 coronavirus pandemic in New York City
+2020 coronavirus pandemic in Nigeria
 2020 coronavirus pandemic in North Dakota
 2020 coronavirus pandemic in Northern Cyprus
 2020 coronavirus pandemic in Oman
@@ -172,54 +191,61 @@ World Dream
 2020 coronavirus pandemic in Peru
 2020 coronavirus pandemic in Qatar
 2020 coronavirus pandemic in Sarawak
-2020 coronavirus pandemic in Saudi Arabia
-2020 coronavirus pandemic in Senegal
-2020 coronavirus pandemic in South Asia
-2020 coronavirus pandemic in Tennessee
-2020 coronavirus pandemic in Trinidad and Tobago
-2020 coronavirus pandemic in Varaždin
-2020 coronavirus pandemic in West Bengal
-2020 coronavirus pandemic in Wyoming
-2020 coronavirus pandemic in Zimbabwe
-2020 coronavirus pandemic in the Maldives
-Ai Fen
-Broad-spectrum antiviral drug
+2020 coronavirus pandemic in Scotland
+2020 coronavirus pandemic in Somalia
+2020 coronavirus pandemic in Syria
+2020 coronavirus pandemic in Texas
+2020 coronavirus pandemic in Utah
+2020 coronavirus pandemic in Wales
+2020 coronavirus pandemic in West Virginia
+2020 coronavirus pandemic in Zagreb
+2020 coronavirus pandemic in the Dominican Republic
+2020 coronavirus pandemic in the State of Palestine
+Aileen Baviera
+Brett Dean
+COVID-19 in pregnancy
 Chen Qiushi
 Claire Byrne
 Corona Rintawan
-Derek Kan
-Edward C. Allworth Veterans' Home
-EvergreenHealth
-Giuliana De Sio
+Daniel Azulay
+Economic impact of the 2019–20 coronavirus pandemic in India
+European Centre for Disease Prevention and Control
+Fangcang hospital
+Germà Colón
+Gita Ramjee
+Harry Aarts
 Health (Preservation and Protection and other Emergency Measures in the Public Interest) Act 2020
 Human rights issues during the 2019–20 coronavirus pandemic
 Index case
-Janata Curfew
+Isaac Robinson (politician)
 Jean Leber
 Joel Szabat
 Kelvin Droegemeier
-List of Philippine public figures who underwent COVID-19 testing
-Liu Wen (doctor)
-Lumpinee Boxing Stadium
+Leishenshan Hospital
+Liu Shouxiang
+Lucia Bosè
+MS Braemar
 Mirga Gražinytė-Tyla
 NHS Nightingale Hospital
 National COVID-19 Coordination Commission
-PREDICT (USAID)
-Patrick Vallance
-Pete Gaynor
-Princess Maria Teresa of Bourbon-Parma
-Richard Wilkins (TV presenter)
-Ruby Princess
-Shi Zhengli
-Siobhán Killeen
-Stanislas Ouaro
-Stephen Hahn (oncologist)
+Orlando McDaniel
+Patient Under Investigation
+Paul Goma
+Piero Schlesinger
+Qiu Jun (bodybuilder)
+Rita Wilson
+Seema Verma
+Siméon Sawadogo
+Spring Education Group
+Stephen Biegun
+Thomas Schäfer
 Timeline of the 2020 coronavirus pandemic in the Philippines
-Draft:2020 coronavirus pandemic in Haryana
-2020 coronavirus pandemic in Akrotiri and Dhekelia
-2020 coronavirus pandemic in Anguilla
-2020 coronavirus pandemic in Barbados
-2020 coronavirus pandemic in Bermuda
+Xie Linka
+2019–20 coronavirus pandemic on social media
+2020 coronavirus pandemic in Angola
+2020 coronavirus pandemic in Antigua and Barbuda
+2020 coronavirus pandemic in Benin
+2020 coronavirus pandemic in Bhutan
 2020 coronavirus pandemic in Curaçao
 2020 coronavirus pandemic in Dominica
 2020 coronavirus pandemic in El Salvador
@@ -229,20 +255,21 @@ Draft:2020 coronavirus pandemic in Haryana
 2020 coronavirus pandemic in Grenada
 2020 coronavirus pandemic in Guam
 2020 coronavirus pandemic in Guinea-Bissau
-2020 coronavirus pandemic in Haiti
-2020 coronavirus pandemic in Laos
-2020 coronavirus pandemic in Libya
-2020 coronavirus pandemic in Mali
-2020 coronavirus pandemic in Mauritania
+2020 coronavirus pandemic in Guyana
+2020 coronavirus pandemic in Iowa
+2020 coronavirus pandemic in Liberia
+2020 coronavirus pandemic in Madagascar
+2020 coronavirus pandemic in Martinique
+2020 coronavirus pandemic in Mayotte
 2020 coronavirus pandemic in Mongolia
 2020 coronavirus pandemic in Nebraska
 2020 coronavirus pandemic in New Hampshire
-2020 coronavirus pandemic in Nigeria
 2020 coronavirus pandemic in Panama
 2020 coronavirus pandemic in Rhode Island
 2020 coronavirus pandemic in Réunion
-2020 coronavirus pandemic in Saint Kitts and Nevis
-2020 coronavirus pandemic in Saint Vincent and the Grenadines
+2020 coronavirus pandemic in Saint Helena
+2020 coronavirus pandemic in Saint Lucia
+2020 coronavirus pandemic in Seychelles
 2020 coronavirus pandemic in Sint Maarten
 2020 coronavirus pandemic in Sudan
 2020 coronavirus pandemic in Tanzania
@@ -252,118 +279,163 @@ Draft:2020 coronavirus pandemic in Haryana
 2020 coronavirus pandemic in the Central African Republic
 2020 coronavirus pandemic in the Democratic Republic of the Congo
 2020 coronavirus pandemic in the Isle of Man
-2020 coronavirus pandemic in the Turks and Caicos Islands
-2020 coronavirus pandemic in the Åland Islands
+2020 coronavirus pandemic in the Republic of the Congo
+2020 coronavirus pandemic in the United States Virgin Islands
+2020 coronavirus pandemic on Long Island
+Anne Rimoin
 Bat SARS-like coronavirus WIV1
+Brendan Murphy (Australian doctor)
 COVID-19 Hospital
+COVID Tracking Project
 Central Hospital of Wuhan
-Chinese Center for Disease Control and Prevention
-Coronavirus Scientific Advisory Board (Turkey)
-Dance Again (Selena Gomez song)
-Duan Zhengcheng
+Chen Yixin
+Ciara Kelly
+Dabie Mountain Regional Medical Centre
+Daniel Yuste
+Detto Mariano
+Emily Adams
 Fariborz Raisdana
 Floyd Cardoz
 Giovanni Battista Rabino
-Health Protection (Coronavirus) Regulations 2020
-Hong Ling (geneticist)
-Italo De Zan
-Joe Grogan
+Hamish Wilson
+Health Protection (Coronavirus, Restrictions) (England) Regulations 2020
+Howard P. Forman
+Impact of the 2019–20 coronavirus pandemic on the cannabis industry
+Jacques Oudin
+John Bessler
 Korea Centers for Disease Control and Prevention
 Li Zehua
 Luciana Lamorgese
-Michael Carton
-MusiCares COVID-19 Relief Fund
+Martinho Lutero Galati
+Muhammed Babandede
 Nasser Shabani
 Operation Broadshare
-Robert Blair (political advisor)
-SHC014-CoV
+Peg Broadbent
+Rent Strike 2020
+SAARC COVID-19 Emergency Fund
+Safe Hands Challenge
 Stephen Schwartz (pathologist)
-Usama Riaz
-Walter Robb (engineer)
-White Center COVID-19 quarantine site
-2020 coronavirus pandemic in British Overseas Territories
+Teleconferencing in the 2019–20 coronavirus pandemic
+Tomas Oneborg
+Vittorio Gregotti
+Wang Xiaodong (born 1960)
+Zororo Makamba
+List of countries by COVID-19 fatalities
 Notifiable diseases in the United Kingdom
 Timeline of the 2020 coronavirus pandemic in Croatia
 Timeline of the 2020 coronavirus pandemic in Pakistan
 2020 coronavirus pandemic in Washington
-Angelo Moreschi
-File:SARS-CoV scanning electron microscope image.jpg
-2020 coronavirus pandemic in Emilia Romagna
-2020 coronavirus pandemic in Nassau County, New York
-2020 coronavirus pandemic in Orange County, California
-2020 coronavirus pandemic in San Diego County, California
-2020 coronavirus pandemic in San Mateo County, California
-2020 coronavirus pandemic in Suffolk County, New York
-2021 Summer Olympics
+File:Novel Coronavirus SARS-CoV-2.jpg
+2020 coronavirus pandemic in Chicago
+2020 coronavirus pandemic in Marche
+2020 coronavirus pandemic in New Orleans
+2020 coronavirus pandemic in San Diego
+2020 coronavirus pandemic in San Francisco County, California
+2020 coronavirus pandemic in Santa Clara County, California
+2020 coronavirus pandemic in Tuscany
 Category:2019–20 coronavirus pandemic
 Category:2019–20 coronavirus pandemic by city
 Category:2019–20 coronavirus pandemic by country and territory
+Category:2019–20 coronavirus pandemic by dependent territory
 Category:2019–20 coronavirus pandemic by location
-Category:2019–20 coronavirus pandemic in Danish dependencies
+Category:2019–20 coronavirus pandemic in China by city
+Category:2019–20 coronavirus pandemic in China templates
 Category:2019–20 coronavirus pandemic in mainland China
 Category:2020 coronavirus pandemic in Afghanistan
-Category:2020 coronavirus pandemic in Asia
-Category:2020 coronavirus pandemic in Bosnia and Herzegovina
+Category:2020 coronavirus pandemic in Argentina templates
+Category:2020 coronavirus pandemic in Austria
+Category:2020 coronavirus pandemic in Bolivia templates
+Category:2020 coronavirus pandemic in Brazil
 Category:2020 coronavirus pandemic in British Overseas Territories
+Category:2020 coronavirus pandemic in Burkina Faso
+Category:2020 coronavirus pandemic in Canada by province or territory
+Category:2020 coronavirus pandemic in Central America
 Category:2020 coronavirus pandemic in Croatia
-Category:2020 coronavirus pandemic in Cyprus
-Category:2020 coronavirus pandemic in Europe
-Category:2020 coronavirus pandemic in France
+Category:2020 coronavirus pandemic in Crown dependencies
+Category:2020 coronavirus pandemic in Denmark
+Category:2020 coronavirus pandemic in Estonia templates
+Category:2020 coronavirus pandemic in Finland
+Category:2020 coronavirus pandemic in France templates
+Category:2020 coronavirus pandemic in Germany by state
 Category:2020 coronavirus pandemic in Hungary
-Category:2020 coronavirus pandemic in Iran
-Category:2020 coronavirus pandemic in Italy
-Category:2020 coronavirus pandemic in Oceania
-Category:2020 coronavirus pandemic in Pakistan
-Category:2020 coronavirus pandemic in South Korea
+Category:2020 coronavirus pandemic in India
+Category:2020 coronavirus pandemic in India templates
+Category:2020 coronavirus pandemic in Indonesia templates
+Category:2020 coronavirus pandemic in Iran templates
+Category:2020 coronavirus pandemic in Ireland templates
+Category:2020 coronavirus pandemic in Italy templates
+Category:2020 coronavirus pandemic in Japan templates
+Category:2020 coronavirus pandemic in Lithuania templates
+Category:2020 coronavirus pandemic in Malaysia by state
+Category:2020 coronavirus pandemic in Norway templates
+Category:2020 coronavirus pandemic in Overseas France
+Category:2020 coronavirus pandemic in Paraguay templates
+Category:2020 coronavirus pandemic in Romania templates
+Category:2020 coronavirus pandemic in Serbia
+Category:2020 coronavirus pandemic in Slovakia templates
+Category:2020 coronavirus pandemic in South America
+Category:2020 coronavirus pandemic in South Korea templates
+Category:2020 coronavirus pandemic in Spain by autonomous community
 Category:2020 coronavirus pandemic in Sweden
+Category:2020 coronavirus pandemic in Switzerland templates
+Category:2020 coronavirus pandemic in Thailand templates
+Category:2020 coronavirus pandemic in Uruguay
 Category:2020 coronavirus pandemic in insular areas of the United States
-Category:2020 coronavirus pandemic in the Dutch Caribbean
+Category:2020 coronavirus pandemic in the Dominican Republic
+Category:2020 coronavirus pandemic in the Netherlands
 Category:2020 coronavirus pandemic in the Philippines
+Category:2020 coronavirus pandemic in the Republic of Ireland
 Category:2020 coronavirus pandemic in the United Kingdom
+Category:2020 coronavirus pandemic in the United States
 Category:2020 coronavirus pandemic in the United States by state
 Category:B-Class COVID-19 articles
 Category:C-Class COVID-19 articles
 Category:COVID-19 articles by importance
+Category:COVID-19 articles needing attention
 Category:Category-Class COVID-19 articles
 Category:Deaths from Coronavirus disease 2019
-Category:Deaths from the 2019–20 coronavirus pandemic in Brazil
 Category:Deaths from the 2019–20 coronavirus pandemic in China
-Category:Deaths from the 2019–20 coronavirus pandemic in Hungary
-Category:Deaths from the 2019–20 coronavirus pandemic in South Korea
-Category:Deaths from the 2019–20 coronavirus pandemic in Sweden
-Category:Deaths from the 2019–20 coronavirus pandemic in Zimbabwe
-Category:Deaths from the 2019–20 coronavirus pandemic in the Philippines
-Category:Deaths from the 2019–20 coronavirus pandemic in the United States
-Category:Deaths from the 2020 coronavirus pandemic in Italy
+Category:Deaths from the 2019–20 coronavirus pandemic in the Netherlands
+Category:Deaths from the 2020 coronavirus pandemic in Burkina Faso
+Category:Deaths from the 2020 coronavirus pandemic in Hungary
+Category:Deaths from the 2020 coronavirus pandemic in Iran
+Category:Deaths from the 2020 coronavirus pandemic in Japan
+Category:Deaths from the 2020 coronavirus pandemic in Serbia
+Category:Deaths from the 2020 coronavirus pandemic in Spain
+Category:Deaths from the 2020 coronavirus pandemic in Turkey
+Category:Deaths from the 2020 coronavirus pandemic in Zimbabwe
+Category:Deaths from the 2020 coronavirus pandemic in the Philippines
+Category:Deaths from the 2020 coronavirus pandemic in the United States
 Category:Draft-Class COVID-19 articles
 Category:Elections postponed due to the 2019–20 coronavirus pandemic
 Category:FA-Class COVID-19 articles
 Category:FM-Class COVID-19 articles
 Category:Films postponed due to the 2019–20 coronavirus pandemic
 Category:Health disasters in Danish dependencies
-Category:Hospitals and medical institutions associated with the 2019–20 coronavirus pandemic
-Category:Impact of the 2019–20 coronavirus pandemic on cinema
-Category:Impact of the 2019–20 coronavirus pandemic on politics
-Category:Impact of the 2019–20 coronavirus pandemic on television
-Category:Impact of the 2019–20 coronavirus pandemic on the restaurant industry
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-Category:Music events cancelled due to the 2019–20 coronavirus pandemic
-Category:NA-Class COVID-19 articles
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-Category:Portal-Class COVID-19 articles
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-Category:Referendums postponed due to the 2019-20 coronavirus pandemic
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-Category:Sports events cancelled due to the 2019–20 coronavirus pandemic
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-Category:United States 2019–20 coronavirus pandemic templates
-Category:White House Coronavirus Task Force
-Category:WikiProject COVID-19 articles
-Category:Wikipedia requested images of COVID-19-related topics
+Category:High-importance COVID-19 articles
+Category:Impact of the 2019–20 coronavirus pandemic
+Category:Impact of the 2019–20 coronavirus pandemic on music
+Category:Impact of the 2019–20 coronavirus pandemic on sports
+Category:Impact of the 2019–20 coronavirus pandemic on the 2020 Summer Olympics
+Category:Impact of the 2019–20 coronavirus pandemic on the video game industry
+Category:Law associated with the 2019–20 coronavirus pandemic
+Category:Low-importance COVID-19 articles
+Category:Motorsport events postponed due to the 2019–20 coronavirus pandemic
+Category:Music events postponed due to the 2019–20 coronavirus pandemic
+Category:NA-importance COVID-19 articles
+Category:Organizations associated with the 2019–20 coronavirus pandemic
+Category:Project-Class COVID-19 articles
+Category:Redirect-Class COVID-19 articles
+Category:Responses to the 2019–20 coronavirus pandemic
+Category:SL-Class COVID-19 articles
+Category:Sports events postponed due to the 2019–20 coronavirus pandemic
+Category:Stub-Class COVID-19 articles
+Category:Timeline of the 2019–20 coronavirus pandemic
+Category:Unassessed COVID-19 articles
+Category:Unknown-importance COVID-19 articles
+Category:WikiProject COVID-19
+Category:WikiProject COVID-19 members
+Category:Wikipedians with COVID-19
 2020 coronavirus pandemic in Georgia
 Coronavirus (disambiguation)
 File:13981210000546637185832350425406 بخش ویژه «بیماران کرونا» بیمارستان امام خمینی.jpg
@@ -426,85 +498,13 @@ File:Coronavirus Starbucks notice.jpg
 File:Covid-19-Handshake-Alternatives-v3.gif
 File:Dried pasta shelves empty in an Australian supermarket.jpg
 File:Exit-Entry Permit for Residents During the Outbreak of 2019-nCoV.png
-File:Health Declaration Card of China (January 2020).jpg
-File:Is COVID-19 like a flu? ENG.png
-File:Novel Coronavirus SARS-CoV-2.jpg
-File:SARS-CoV-2-CDC-23312.png
-File:SARS-CoV-2 scanning electron microscope image.jpg
-File:SST Corona A2 plakat print V2.pdf
-File:SST Corona A4 Print-Somali.png
-File:SST Corona A4 Print AR-page-0.png
-File:SST Corona A4 print-V2.png
-File:Surgical mask and 84 disinfectant liquid purchase limit notice at a CSF Market (20200202155633).jpg
-File:U.S. Government COVID-19 Response Plan, March 13, 2020.pdf
-File:Workers having their temperatures taken as they enter an industrial park.jpg
-File:Строительство инфекционного центра в Новой Москве (21 марта; А. Бочкарёв) 1.jpg
-File:关于做好不明原因肺炎救治工作的紧急通知.pdf
-File:湖南抗疫一线医生父子隔防护玻璃互相打气.webm
-File:雁塔 曲江收费站的防疫检查 01.jpg
-Portal:Pandemic
-Project:Version 1.0 Editorial Team/COVID-19 articles by quality log
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-Project:WikiProject COVID-19/Article report
-Project:WikiProject COVID-19/Case Count Task Force
-Project:WikiProject COVID-19/Equipments Task Force
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+Template:2019–20 coronavirus pandemic data/Russia medical cases
+Template:2019–20 coronavirus pandemic data/San Marino medical cases chart
+Template:2019–20 coronavirus pandemic data/School closures
+Template:2019–20 coronavirus pandemic data/Senegal medical cases chart
+Template:2019–20 coronavirus pandemic data/Singapore medical cases
+Template:2019–20 coronavirus pandemic data/Singapore untraced cases
+Template:2019–20 coronavirus pandemic data/Slovakia medical cases by region
+Template:2019–20 coronavirus pandemic data/Slovenia medical cases
+Template:2019–20 coronavirus pandemic data/South Africa medical cases
+Template:2019–20 coronavirus pandemic data/South Korea medical cases
+Template:2019–20 coronavirus pandemic data/Spain medical cases
+Template:2019–20 coronavirus pandemic data/Sri Lanka medical cases chart
 Template:2019–20 coronavirus pandemic data/Sweden medical cases
 Template:2019–20 coronavirus pandemic data/Switzerland medical cases
 Template:2019–20 coronavirus pandemic data/Symptoms
@@ -1245,25 +1419,26 @@ Template:2019–20 coronavirus pandemic data/United Arab Emirates medical cases
 Template:2019–20 coronavirus pandemic data/United Kingdom medical cases
 Template:2019–20 coronavirus pandemic data/United States/Alabama medical cases chart
 Template:2019–20 coronavirus pandemic data/United States/Arizona medical cases chart
-Template:2019–20 coronavirus pandemic data/United States/California/San Francisco County medical cases chart
-Template:2019–20 coronavirus pandemic data/United States/California medical cases chart
-Template:2019–20 coronavirus pandemic data/United States/Connecticut medical cases chart
-Template:2019–20 coronavirus pandemic data/United States/Florida medical cases chart
-Template:2019–20 coronavirus pandemic data/United States/Hawaii medical cases chart
-Template:2019–20 coronavirus pandemic data/United States/Illinois medical cases chart
-Template:2019–20 coronavirus pandemic data/United States/Iowa medical cases chart
-Template:2019–20 coronavirus pandemic data/United States/Kentucky medical cases chart
-Template:2019–20 coronavirus pandemic data/United States/Louisiana medical cases chart
-Template:2019–20 coronavirus pandemic data/United States/Maryland medical cases chart
-Template:2019–20 coronavirus pandemic data/United States/Michigan medical cases chart
-Template:2019–20 coronavirus pandemic data/United States/Mississippi medical cases chart
-Template:2019–20 coronavirus pandemic data/United States/Montana medical cases chart
-Template:2019–20 coronavirus pandemic data/United States/Nevada medical cases chart
-Template:2019–20 coronavirus pandemic data/United States/New Jersey medical cases chart
-Template:2019–20 coronavirus pandemic data/United States/New York State medical cases chart
-Template:2019–20 coronavirus pandemic data/United States/North Dakota medical cases chart
-Template:2019–20 coronavirus pandemic data/United States/Oklahoma medical cases chart
-Template:2019–20 coronavirus pandemic data/United States/Pennsylvania medical cases chart
+Template:2019–20 coronavirus pandemic data/United States/California/Los Angeles County medical cases chart
+Template:2019–20 coronavirus pandemic data/United States/California/Santa Clara County medical cases chart
+Template:2019–20 coronavirus pandemic data/United States/Colorado medical cases chart
+Template:2019–20 coronavirus pandemic data/United States/Delaware medical cases chart
+Template:2019–20 coronavirus pandemic data/United States/Georgia medical cases chart
+Template:2019–20 coronavirus pandemic data/United States/Idaho medical cases chart
+Template:2019–20 coronavirus pandemic data/United States/Indiana medical cases chart
+Template:2019–20 coronavirus pandemic data/United States/Kansas medical cases chart
+Template:2019–20 coronavirus pandemic data/United States/Louisiana/Orleans Parish medical cases chart
+Template:2019–20 coronavirus pandemic data/United States/Maine medical cases chart
+Template:2019–20 coronavirus pandemic data/United States/Massachusetts medical cases chart
+Template:2019–20 coronavirus pandemic data/United States/Minnesota medical cases chart
+Template:2019–20 coronavirus pandemic data/United States/Missouri medical cases chart
+Template:2019–20 coronavirus pandemic data/United States/Nebraska medical cases chart
+Template:2019–20 coronavirus pandemic data/United States/New Hampshire medical cases chart
+Template:2019–20 coronavirus pandemic data/United States/New Mexico medical cases chart
+Template:2019–20 coronavirus pandemic data/United States/North Carolina medical cases chart
+Template:2019–20 coronavirus pandemic data/United States/Ohio medical cases chart
+Template:2019–20 coronavirus pandemic data/United States/Oregon medical cases chart
+Template:2019–20 coronavirus pandemic data/United States/Puerto Rico medical cases chart/doc
 Template:2019–20 coronavirus pandemic data/United States/South Carolina medical cases chart
 Template:2019–20 coronavirus pandemic data/United States/Tennessee medical cases chart
 Template:2019–20 coronavirus pandemic data/United States/Utah medical cases chart
@@ -1278,20 +1453,21 @@ Template:2019–20 coronavirus pandemic data/layout
 Template:2020 coronavirus pandemic by Arkansas county
 Template:2020 coronavirus pandemic data/Europe medical cases chart
 Template:2020 coronavirus pandemic in France
-Template:2020 coronavirus pandemic in the United Kingdom
-Template:2020 coronavirus quarantines
-Template:AHollender (WMF)/sandbox/2019–20 coronavirus pandemic data/styles.css
-Template:COVID-19 Barnstar
-Template:COVID19 GS editnotice
-Template:COVID19 sanctions/doc
-Template:Coronavirus data/Patients characteristics
+Template:2020 coronavirus pandemic in the Philippines
+Template:2020 coronavirus pandemic in the United States
+Template:2020 coronavirus quarantines outside Hubei
+Template:COVID-19-stub
+Template:COVID-19 testing
+Template:COVID19 sanctions
+Template:COVID invite
 Template:Current confirmed COVID-19 cases in Greece by gender and age
-Template:Did you know nominations/Disease X
-Template:Did you know nominations/Kurti cabinet
-Template:Editnotices/Page/Talk:2019–20 coronavirus pandemic
-Template:Interactive COVID-19 maps/Cumulative confirmed cases
-Template:Interactive COVID-19 maps/Daily confirmed cases
-Template:Interactive COVID-19 maps/Per capita confirmed cases
+Template:Did you know nominations/Coronavirus recession
+Template:Did you know nominations/Impact of the 2019–20 coronavirus outbreak on cinema
+Template:Editnotices/Page/2019–20 coronavirus pandemic
+Template:Interactive COVID-19 maps
+Template:Interactive COVID-19 maps/Cumulative deaths
+Template:Interactive COVID-19 maps/Daily deaths
+Template:Interactive COVID-19 maps/Per capita confirmed cases/Large
 Template:Interactive COVID-19 maps/Per capita daily confirmed cases
 Template:Interactive COVID-19 maps/Per capita deaths
 Template:Interactive COVID-19 maps/common/botsandbox
@@ -1302,29 +1478,31 @@ Template:User WikiProject COVID-19
 Template:WikiProject COVID-19
 Template:WikiProject COVID-19/doc
 Template:WikiProject COVID-19 topicon
-Draft:2020 coronavirus outbreak in Ivory Coast
-Draft:2020 coronavirus pandemic in Columbus, Ohio
-Draft:Blog posts in R on coronavirus covid-19
-Draft:COVID-19 Open Science Initiatives
-Draft:Corizidox B-4
-Draft:Coronavirus: Travel restrictions, border shutdowns by country
-Draft:Coronials
-Draft:Covidiot
-Draft:Deaths from covid19
-Draft:Great Toilet Paper Panic of 2020
-Draft:Impact of the 2019–20 coronavirus pandemic on wildlife
-Draft:List of Catholic Churches and Masses affected affected by the Coronavirus Pandemic by Diocese
+Draft:2020 coronavirus outbreak in Azerbaijan
+Draft:2020 coronavirus outbreak in the Netherlands
+Draft:2020 coronavirus pandemic in the Falkland Islands
+Draft:Blood plasma and Covid 19
+Draft:COVID 19 in Zimbabwe
+Draft:Corona virus cases all country list
+Draft:Coronavirus in Democratic Republic of the Congo
+Draft:Covid-19 Quarantine Party (Spotify Playlist)
+Draft:Covidian Era
+Draft:Danger Of Covid-19 To Influenza
+Draft:Everything You Need to Know About Coronavirus
+Draft:Hoarding due to the 2019-2020 Coronavirus Outbreak
+Draft:Learn at Home
+Draft:List of Medical Professionals Who Died During the COVID-19 Pandemic
 Draft:NAV Centre
-Draft:Orange Ribbon to symbolise the suffering of people who are victims of COVID-19
-Draft:Quarantine Marketing
-Draft:Severe acute respiratory syndrome-related coronavirus
-Draft:Template:2019–20 coronavirus pandemic data/North Macedonia medical cases chart
-Gaetano Manfredi
-Liang Wudong
-Aileen Baviera
-Azam Khan (squash player)
-Germà Colón
-Kerstin Behrendtz
-Martinho Lutero Galati
-Mike Longo
-Orlando McDaniel
+Draft:North Korea Coronavirus
+Draft:Possible solutions of Covid 19
+Draft:Santa Clara Coronavirus Data
+Draft:State of Emergency in Canada
+Draft:UK Coronavirus Cancer Monitoring Project
+Draft:What is COVID-19
+Severe acute respiratory syndrome-related coronavirus
+Anders Tegnell
+Biosecurity in Australia
+National Cabinet of Australia
+Responses to the 2019–20 coronavirus pandemic in March 2020
+Viktor Dashkevich
+William B. Helmreich

diff --git a/wikipedia/scripts/digobs.py b/wikipedia/scripts/digobs.py
new file mode 100644 (file)
index 0000000..0bce250
--- /dev/null
+++ b/wikipedia/scripts/digobs.py
@@ -0,0 +1,27 @@
+#!/usr/bin/env python3
+
+import sys
+import subprocess
+import logging
+
+def git_hash(short=False):
+    if short:
+        return subprocess.check_output(['git', 'rev-parse', '--short', 'HEAD']).decode().strip()
+    else:
+        subprocess.check_output(['git', 'rev-parse', 'HEAD']).decode().strip()
+
+def get_loglevel(arg_loglevel):
+    loglevel_mapping = { 'debug' : logging.DEBUG,
+                         'info' : logging.INFO,
+                         'warning' : logging.WARNING,
+                         'error' : logging.ERROR,
+                         'critical' : logging.CRITICAL }
+
+    if arg_loglevel in loglevel_mapping:
+        loglevel = loglevel_mapping[arg_loglevel]
+        return loglevel
+    else:
+        print("Choose a valid log level: debug, info, warning, error, or critical", file=sys.stderr)
+        return logging.INFO
+
+

diff --git a/wikipedia/scripts/fetch_enwiki_daily_views.py b/wikipedia/scripts/fetch_enwiki_daily_views.py
new file mode 100755 (executable)
index 0000000..7015a3b
--- /dev/null
+++ b/wikipedia/scripts/fetch_enwiki_daily_views.py
@@ -0,0 +1,112 @@
+#!/usr/bin/env python3
+
+###############################################################################
+#
+# This script assumes the presence of the COVID-19 repo.
+# 
+# It (1) reads in the article list and then (2) calls the Wikimedia API to 
+# fetch view information for each article. Output is to (3) JSON and TSV.
+#
+###############################################################################
+
+import sys
+import requests
+import argparse
+import json
+import time
+import os.path
+import datetime
+import logging
+from csv import DictWriter
+import digobs
+#import feather #TBD
+
+def parse_args():
+    parser = argparse.ArgumentParser(description='Call the views API to collect Wikipedia view data.')
+    parser.add_argument('-o', '--output_folder', help='Where to save output', default="wikipedia/data", type=str)
+    parser.add_argument('-i', '--article_file', help='File listing article names', default="wikipedia/resources/enwp_wikiproject_covid19_articles.txt", type=str)
+    parser.add_argument('-d', '--query_date', help='Date if not yesterday, in YYYYMMDD format.', type=str)
+    parser.add_argument('-L', '--logging_level', help='Logging level. Options are debug, info, warning, error, critical. Default: info.', default='info', type=str), 
+    parser.add_argument('-W', '--logging_destination', help='Logging destination file. (default: standard error)', type=str), 
+    args = parser.parse_args()
+    return(args)
+
+def main():
+
+    args = parse_args()
+
+    outputPath = args.output_folder
+    articleFile = args.article_file
+
+    #handle -d
+    if args.query_date:
+        query_date = args.query_date
+    else:
+        yesterday = datetime.datetime.today() - datetime.timedelta(days=1)
+        query_date = yesterday.strftime("%Y%m%d")
+
+    #handle -L
+    loglevel = digobs.get_loglevel(args.logging_level)
+
+    #handle -W
+    if args.logging_destination:
+        logging.basicConfig(filename=args.logging_destination, filemode='a', level=loglevel)
+    else:
+        logging.basicConfig(level=loglevel)
+
+    export_time = str(datetime.datetime.now())
+    export_date = datetime.datetime.today().strftime("%Y%m%d")
+
+    logging.info(f"Starting run at {export_time}")
+    logging.info(f"Last commit: {digobs.git_hash()}")
+
+    #1 Load up the list of article names
+    j_outfilename = os.path.join(outputPath, f"digobs_covid19-wikipedia-enwiki_dailyviews-{export_date}.json")
+    t_outfilename = os.path.join(outputPath, f"digobs_covid19-wikipedia-enwiki_dailyviews-{export_date}.tsv")
+
+    with open(articleFile, 'r') as infile:
+        articleList = list(map(str.strip, infile))
+
+    success = 0 #for logging how many work/fail
+    failure = 0 
+
+    #3 Save results as a JSON and TSV
+    with open(j_outfilename, 'w') as j_outfile, \
+         open(t_outfilename, 'w') as t_outfile:
+
+        #2 Repeatedly call the API with that list of names
+        for a in articleList:
+            url= f"https://wikimedia.org/api/rest_v1/metrics/pageviews/per-article/en.wikipedia/all-access/all-agents/{a}/daily/{query_date}00/{query_date}00"
+
+            response = requests.get(url)
+            if response.ok:
+                jd = response.json()["items"][0]
+                success = success + 1
+            else:
+                failure = failure + 1
+                logging.warning(f"Failure: {response.status_code} from {url}")
+
+            # start writing the CSV File if it doesn't exist yet
+            try:
+                dw
+            except NameError:
+                dw = DictWriter(t_outfile, sorted(jd.keys()), delimiter='\t')
+                dw.writeheader()
+
+            logging.debug(f"printing data: {jd}")
+
+            # write out the line of the json file
+            print(json.dumps(jd), file=j_outfile)
+
+            # write out of the csv file
+            dw.writerow(jd)
+
+    # f_Out = outputPath + "dailyviews" + query_date + ".feather"
+    # read the json back in and make a feather file? 
+    logging.debug(f"Run complete at {datetime.datetime.now()}")
+    logging.info(f"Processed {success} successful URLs and {failure} failures.")
+
+
+if __name__ == "__main__":
+
+    main()

diff --git a/wikipedia/scripts/fetch_enwiki_revisions.py b/wikipedia/scripts/fetch_enwiki_revisions.py
new file mode 100755 (executable)
index 0000000..2c0ef7a
--- /dev/null
+++ b/wikipedia/scripts/fetch_enwiki_revisions.py
@@ -0,0 +1,151 @@
+#!/usr/bin/env python3
+
+###############################################################################
+#
+# This script assumes the presence of the COVID-19 repo.
+# 
+# It (1) reads in the article list and then (2) calls the Wikimedia API to 
+# fetch view information for each article. Output is to (3) JSON and TSV.
+#
+###############################################################################
+
+import argparse
+import logging
+import os.path
+import json
+import datetime
+
+from requests import Request
+from csv import DictWriter
+from mw import api
+import digobs
+
+
+def parse_args():
+
+    parser = argparse.ArgumentParser(description='Call the views API to collect Wikipedia revision data.')
+    parser.add_argument('-o', '--output_folder', help='Where to save output', default="wikipedia/data", type=str)
+    parser.add_argument('-i', '--article_file', help='File listing article names', default="wikipedia/resources/enwp_wikiproject_covid19_articles.txt", type=str)
+    parser.add_argument('-L', '--logging_level', help='Logging level. Options are debug, info, warning, error, critical. Default: info.', default='info', type=str), 
+    parser.add_argument('-W', '--logging_destination', help='Logging destination file. (default: standard error)', type=str), 
+    args = parser.parse_args()
+    return(args)
+
+def main():
+    args = parse_args()
+
+    output_path = args.output_folder
+    article_filename = args.article_file
+
+    #handle -L
+    loglevel = digobs.get_loglevel(args.logging_level)
+
+    #handle -W
+    if args.logging_destination:
+        logging.basicConfig(filename=args.logging_destination, filemode='a', level=loglevel)
+    else:
+        logging.basicConfig(level=loglevel)
+
+    export_time = str(datetime.datetime.now())
+    export_date = datetime.datetime.today().strftime("%Y%m%d")
+
+    logging.info(f"Starting run at {export_time}")
+    logging.info(f"Last commit: {digobs.git_hash()}")
+
+    json_output_filename = os.path.join(output_path, f"digobs_covid19-wikipedia-enwiki_revisions-{export_date}.json")
+    tsv_output_filename =  os.path.join(output_path, f"digobs_covid19-wikipedia-enwiki_revisions-{export_date}.tsv")
+    
+    api_session = api.Session("https://en.wikipedia.org/w/api.php")
+
+    # list of properties from the API we want to gather (basically all of
+    # them supported by mediawik-utilities)
+
+    rv_props =  {'revid' : 'ids',
+                 'timestamp' : 'timestamp',
+                 'user' : 'user',
+                 'userid' : 'userid',
+                 'size' : 'size',
+                 'sha1' : 'sha1',
+                 'contentmodel' : 'contentmodel',
+                 'tags' : 'tags',
+                 'flags' : 'flags',
+                 'comment' : 'comment',
+                 'content' : 'content' }
+
+    exclude_from_tsv = ['tags', 'comment', 'content', 'flags']
+
+    # load the list of articles
+    with open(article_filename, 'r') as infile:
+        article_list= list(map(str.strip, infile))
+
+    def get_revisions_for_page(title):
+        return api_session.revisions.query(properties=rv_props.values(),
+                                           titles={title},
+                                           direction="newer")
+
+    tsv_fields = ['title', 'pageid', 'namespace']
+    tsv_fields = tsv_fields + list(rv_props.keys())
+
+    # drop fields that we identified for exclusion
+    tsv_fields = [e for e in tsv_fields if e not in exclude_from_tsv]
+
+    # add special export fields
+    tsv_fields = tsv_fields + ['anon', 'minor', 'url', 'export_timestamp', 'export_commit']
+
+    export_info = { 'git_commit' : digobs.git_hash(),
+                    'timestamp' : export_time }
+
+    with open(json_output_filename, 'w') as json_output, \
+         open(tsv_output_filename, 'w') as tsv_output:
+
+        tsv_writer = DictWriter(tsv_output, fieldnames=tsv_fields, delimiter="\t")
+        tsv_writer.writeheader()
+
+        for article in article_list:
+            logging.info(f"pulling revisions for: {article}")
+            for rev in get_revisions_for_page(article):
+                logging.debug(f"processing raw revision: {rev}")
+
+                # add export metadata
+                rev['exported'] = export_info
+
+                # save the json version of the code
+                print(json.dumps(rev), file=json_output)
+
+                # handle missing data
+                if "sha1" not in rev:
+                    rev["sha1"] = ""
+
+                if "userhidden" in rev:
+                    rev["user"] = ""
+                    rev["userid"] = ""
+
+                # recode anon so it's true or false instead of present/missing
+                if "anon" in rev:
+                    rev["anon"] = True
+                else:
+                    rev["anon"] = False
+                    
+                # let's recode "minor" in the same way
+                if "minor" in rev:
+                    rev["minor"] = True
+                else:
+                    rev["minor"] = False
+
+                # add page title information
+                rev['title'] = rev['page']['title']
+                rev['pageid'] = rev['page']['pageid']
+                rev['namespace'] = rev['page']['ns']
+
+                # construct a URL
+                rev['url'] = Request('GET', 'https://en.wikipedia.org/w/index.php',
+                                     params={'title' : rev['title'].replace(" ", "_"),
+                                            'oldid' : rev['revid']}).prepare().url
+
+                rev['export_timestamp'] = export_time
+                rev['export_commit'] = digobs.git_hash(short=True)
+
+                tsv_writer.writerow({k: rev[k] for k in tsv_fields})
+
+if __name__ == "__main__":
+    main()

diff --git a/wikipedia_views/scripts/wikiproject_scraper.py b/wikipedia/scripts/wikiproject_scraper.py
similarity index 74%
rename from wikipedia_views/scripts/wikiproject_scraper.py
rename to wikipedia/scripts/wikiproject_scraper.py
index 9d209a98b5912e6a075ca643d514b7a7aaae3609..6e01051dd531b98b1d768dc0db55babe93581f7c 100755 (executable)
--- a/wikipedia_views/scripts/wikiproject_scraper.py
+++ b/wikipedia/scripts/wikiproject_scraper.py
@@ -18,6 +18,7 @@
 ###############################################################################
 
 import argparse
+import subprocess
 import requests
 import datetime
 import logging
@@ -28,48 +29,45 @@ from bs4 import BeautifulSoup
 def parse_args():
 
     parser = argparse.ArgumentParser(description='Get a list of pages tracked by the COVID-19 Wikiproject.')
-    parser.add_argument('-o', '--output_folder', help='Where to save output', default="../resources/", type=str)
+    parser.add_argument('-o', '--output_file', help='Where to save output', default="wikipedia/resources/enwp_wikiproject_covid19_articles.txt", type=str)
     parser.add_argument('-L', '--logging_level', help='Logging level. Options are debug, info, warning, error, critical. Default: info.', default='info'), 
-    parser.add_argument('-W', '--logging_destination', help='Logging destination.', default='../logs/') 
+    parser.add_argument('-W', '--logging_destination', help='Logging destination file. (default: standard error)', type=str), 
     args = parser.parse_args()
 
     return(args)
 
-
 def main():
 
     args = parse_args()
-
-    outputPath = args.output_folder
-
-    #handle -W
-    today = datetime.datetime.today().strftime('%Y%m%d')
-    dest = args.logging_destination
-    logHome = f"{dest}scraping{today}"
+    outputFile = args.output_file
 
     #handle -L
-    loglevel = args.logging_level
-    if loglevel == 'debug':
-        logging.basicConfig(filename=logHome, filemode='a', level=logging.DEBUG)
-    elif loglevel == 'info':
-        logging.basicConfig(filename=logHome, filemode='a', level=logging.INFO)
-    elif loglevel == 'warning':
-        logging.basicConfig(filename=logHome, filemode='a', level=logging.WARNING)
-    elif loglevel == 'error':
-        logging.basicConfig(filename=logHome, filemode='a', level=logging.ERROR)
-    elif loglevel == 'critical':
-        logging.basicConfig(filename=logHome, filemode='a', level=logging.CRITICAL)
+    loglevel_mapping = { 'debug' : logging.DEBUG,
+                         'info' : logging.INFO,
+                         'warning' : logging.WARNING,
+                         'error' : logging.ERROR,
+                         'critical' : logging.CRITICAL }
+
+    if args.logging_level in loglevel_mapping:
+        loglevel = loglevel_mapping[args.logging_level]
     else:
-        print("Choose a valid log level: debug, info, warning, error, or critical")
+        print("Choose a valid log level: debug, info, warning, error, or critical") 
         exit
+        
+    #handle -W
+    if args.logging_destination:
+        logging.basicConfig(filename=args.logging_destination, filemode='a', level=loglevel)
+    else:
+        logging.basicConfig(level=loglevel)
 
+    export_git_hash = subprocess.check_output(['git', 'rev-parse', 'HEAD']).decode().strip()
+    export_git_short_hash = subprocess.check_output(['git', 'rev-parse', '--short', 'HEAD']).decode().strip()
+    export_time = str(datetime.datetime.now())
 
-    outputFile = f"{outputPath}articles.txt"
-    logging.debug(f"Starting scrape at {datetime.datetime.now()} and destructively outputting article list to {outputFile}.")
-    #1 How many hits to the fcgi?
-
-    #make a session
+    logging.info(f"Starting at {export_time} and destructively outputting article list to {outputFile}.")
+    logging.info(f"Last commit: {export_git_hash}")
 
+    #1 How many hits to the fcgi?
     session = requests.Session()
 
     originalURL = "https://tools.wmflabs.org/enwp10/cgi-bin/list2.fcgi?run=yes&projecta=COVID-19&namespace=&pagename=&quality=&importance=&score=&limit=1000&offset=1&sorta=Importance&sortb=Quality"

diff --git a/wikipedia_views/scripts/fetch_daily_views.py b/wikipedia_views/scripts/fetch_daily_views.py
deleted file mode 100755 (executable)
index e3a2ff4..0000000
--- a/wikipedia_views/scripts/fetch_daily_views.py
+++ /dev/null
@@ -1,125 +0,0 @@
-#!/usr/bin/env python3
-
-###############################################################################
-#
-# This script assumes the presence of the COVID-19 repo.
-# 
-# It (1) reads in the article list and then (2) calls the Wikimedia API to 
-# fetch view information for each article. Output is to (3) JSON and TSV.
-#
-###############################################################################
-
-
-import requests
-import argparse
-import json
-import csv
-import time
-import os.path
-import datetime
-import logging
-#import feather #TBD
-
-
-def parse_args():
-
-    parser = argparse.ArgumentParser(description='Call the views API repeatedly.')
-    parser.add_argument('-o', '--output_folder', help='Where to save output', default="../data/", type=str)
-    parser.add_argument('-i', '--article_file', help='File listing article names', default="../resources/articles.txt", type=str)
-    parser.add_argument('-d', '--query_date', help='Date if not yesterday, in YYYYMMDD format please.', type=str)
-    parser.add_argument('-L', '--logging_level', help='Logging level. Options are debug, info, warning, error, critical. Default: info.', default='info'), 
-    parser.add_argument('-W', '--logging_destination', help='Logging destination.', default='../logs/'), 
-    args = parser.parse_args()
-
-    return(args)
-
-
-def main():
-
-    args = parse_args()
-
-    outputPath = args.output_folder
-    articleFile = args.article_file
-
-    #handle -d
-    if (args.query_date):
-        queryDate = args.query_date
-    else:
-        yesterday = datetime.datetime.today() - datetime.timedelta(days=1)
-        queryDate = yesterday.strftime("%Y%m%d")
-
-    queryDate = queryDate + "00" #requires specifying hours
-
-    #handle -W
-    logHome = f"{args.logging_destination}dailylogrun{datetime.datetime.today().strftime('%Y%m%d')}"
-
-    #handle -L
-    loglevel = args.logging_level
-    if loglevel == 'debug':
-        logging.basicConfig(filename=logHome, filemode='a', level=logging.DEBUG)
-    elif loglevel == 'info':
-        logging.basicConfig(filename=logHome, filemode='a', level=logging.INFO)
-    elif loglevel == 'warning':
-        logging.basicConfig(filename=logHome, filemode='a', level=logging.WARNING)
-    elif loglevel == 'error':
-        logging.basicConfig(filename=logHome, filemode='a', level=logging.ERROR)
-    elif loglevel == 'critical':
-        logging.basicConfig(filename=logHome, filemode='a', level=logging.CRITICAL)
-    else: 
-        print("Choose a valid log level: debug, info, warning, error, or critical") 
-        exit
-
-
-    articleList = []
-    logging.debug(f"Starting run at {datetime.datetime.now()}")
-
-    #1 Load up the list of article names
-
-    j_Out = f"{outputPath}dailyviews{queryDate}.json"
-    t_Out = f"{outputPath}dailyviews{queryDate}.tsv"
-
-    with open(articleFile, 'r') as infile:
-        articleList = list(infile)
-
-    j = []
-    success = 0 #for logging how many work/fail
-    failure = 0 
-
-    #2 Repeatedly call the API with that list of names
-
-    for a in articleList:
-        a = a.strip("\"\n") #destringify
-        url= f"https://wikimedia.org/api/rest_v1/metrics/pageviews/per-article/en.wikipedia/all-access/all-agents/{a}/daily/{queryDate}/{queryDate}"
-
-        response = requests.get(url)
-        if response.ok:
-            jd = json.loads(response.content)
-            j.append(jd["items"][0])
-            time.sleep(.1)
-            success = success + 1
-        else:
-            failure = failure + 1
-            logging.warning(f"Failure: {response.status_code} from {url}")
-
-    #3 Save results as a JSON and TSV
-
-    #all data in j now, make json file
-    logging.info(f"Processed {success} successful URLs and {failure} failures.")
-
-    with open(j_Out, 'w') as j_outfile: 
-        json.dump(j, j_outfile, indent=2)
-
-    with open(t_Out, 'w') as t_outfile:
-        dw = csv.DictWriter(t_outfile, sorted(j[0].keys()), delimiter='\t')
-        dw.writeheader()
-        dw.writerows(j)
-
-    logging.debug(f"Run complete at {datetime.datetime.now()}")
-
-    # f_Out = outputPath + "dailyviews" + queryDate + ".feather"
-    # read the json back in and make a feather file? 
-
-
-if __name__ == "__main__":
-
-    main()