]> code.communitydata.science - covid19.git/commitdiff
Merge pull request #7 from kayleachampion/master
authorKaylea Champion <khascall@gmail.com>
Sun, 29 Mar 2020 18:39:32 +0000 (11:39 -0700)
committerGitHub <noreply@github.com>
Sun, 29 Mar 2020 18:39:32 +0000 (11:39 -0700)
cleanup with merge

transliterations/analysis/output/top5_queries_per_term_per_date.csv
transliterations/analysis/related_searches_example.R
wikipedia_views/analysis/output/top10_views_by_project_date.csv [new file with mode: 0644]
wikipedia_views/analysis/pageview_example.R [new file with mode: 0644]

index 5ce1aa768393d8ec3a2ae48f2ecf85c261d0f94f..83b5aff20bc874a1ab4dbe4b7aabe3f501f9e9a6 100644 (file)
@@ -1,6 +1,11 @@
 "term","date","query.1","query.2","query.3","query.4","query.5"
-"coronavirus","2020-03-27",coronavirus update,corona,coronavirus symptoms,news coronavirus,coronavirus cases
-"covid-19","2020-03-27",covid-19 coronavirus,coronavirus,covid,covid-19 cases,covid 19
-"covid-19 pandemic","2020-03-27",coronavirus,covid-19 coronavirus pandemic,coronavirus pandemic,who,is covid-19 a pandemic
-"covid19","2020-03-27",covid,covid 19,coronavirus covid19,coronavirus,covid19 cases
-"sars-cov-2","2020-03-27",coronavirus,coronavirus sars-cov-2,covid-19,covid-19 sars-cov-2,sars
+"coronavirus",2020-03-27,coronavirus update,corona,coronavirus symptoms,news coronavirus,coronavirus cases
+"covid-19",2020-03-27,covid-19 coronavirus,coronavirus,covid,covid-19 cases,covid 19
+"covid-19 pandemic",2020-03-27,coronavirus,covid-19 coronavirus pandemic,coronavirus pandemic,who,is covid-19 a pandemic
+"covid19",2020-03-27,covid,covid 19,coronavirus covid19,coronavirus,covid19 cases
+"sars-cov-2",2020-03-27,coronavirus,coronavirus sars-cov-2,covid-19,covid-19 sars-cov-2,sars
+"coronavirus",2020-03-28,coronavirus update,corona,coronavirus symptoms,news coronavirus,coronavirus cases
+"covid-19",2020-03-28,coronavirus,coronavirus covid-19,covid,covid-19 cases,covid 19
+"covid-19 pandemic",2020-03-28,coronavirus pandemic,coronavirus,covid-19 coronavirus pandemic,is covid-19 a pandemic,who pandemic
+"covid19",2020-03-28,covid,covid 19,coronavirus covid19,coronavirus,covid19 cases
+"sars-cov-2",2020-03-28,coronavirus sars-cov-2,coronavirus,sars-cov-2 covid-19,covid-19,sars
index 2576d4a862b066423fa6142ee3c53e5dfc4580a3..e1197b62796ba05814eda58ea8b93a203cd43df4 100644 (file)
@@ -3,16 +3,24 @@
 ### 
 ### Minimal example analysis file using trending search data
 
-### Identify data source directory and file
-DataDir <- ("../data/output/")
-DataFile <- ("related_searches_top.csv")
-
 ### Import and cleanup data
-related.searches.top <- read.table(paste(DataDir,DataFile,
-                                 sep=""),
+
+DataURL <-
+    url("https://github.com/CommunityDataScienceCollective/COVID-19_Digital_Observatory/blob/master/transliterations/data/output/related_searches_top.csv")
+
+related.searches.top <- read.table(DataURL,
                            sep=",", header=TRUE,
                            stringsAsFactors=FALSE) 
 
+### Alternatively, uncomment and run if working locally with full git tree
+### Identify data source directory and file
+## DataDir <- ("../data/output/")
+## DataFile <- ("related_searches_top.csv")
+
+## related.searches.top <- read.table(paste(DataDir,DataFile, sep=""),
+##                                   sep=",", header=TRUE,
+##                                   stringsAsFactors=FALSE)
+
 ### Aggregate top 5 search queries by term/day
 top5.per.term.date <- aggregate(query ~ term + date,
                                 data=related.searches.top,
diff --git a/wikipedia_views/analysis/output/top10_views_by_project_date.csv b/wikipedia_views/analysis/output/top10_views_by_project_date.csv
new file mode 100644 (file)
index 0000000..796af10
--- /dev/null
@@ -0,0 +1,11 @@
+"article","project","timestamp","views"
+"2019–20_coronavirus_pandemic","en.wikipedia","2020032600",1148284
+"2020_coronavirus_pandemic_in_India","en.wikipedia","2020032600",513901
+"Coronavirus","en.wikipedia","2020032600",397959
+"2020_coronavirus_pandemic_in_the_United_States","en.wikipedia","2020032600",337676
+"2019–20_coronavirus_pandemic_by_country_and_territory","en.wikipedia","2020032600",298603
+"2020_coronavirus_pandemic_in_Italy","en.wikipedia","2020032600",297687
+"Coronavirus_disease_2019","en.wikipedia","2020032600",292272
+"2020_coronavirus_pandemic_in_Spain","en.wikipedia","2020032600",114732
+"2020_coronavirus_pandemic_in_the_United_Kingdom","en.wikipedia","2020032600",111856
+"Anthony_Fauci","en.wikipedia","2020032600",103205
diff --git a/wikipedia_views/analysis/pageview_example.R b/wikipedia_views/analysis/pageview_example.R
new file mode 100644 (file)
index 0000000..8a7aba3
--- /dev/null
@@ -0,0 +1,51 @@
+### COVID-19 Digital Observatory
+### 2020-03-28
+### 
+### Minimal example analysis file using pageview data
+
+library(tidyverse)
+library(ggplot2)
+library(scales)
+
+### Import and cleanup data
+
+DataURL <-
+    url("https://github.com/CommunityDataScienceCollective/COVID-19_Digital_Observatory/raw/master/wikipedia_views/data/dailyviews2020032600.tsv")
+
+views <-
+    read.table(DataURL, sep="\t", header=TRUE, stringsAsFactors=FALSE) 
+
+### Alternatively, uncomment and run if working locally with full git
+### tree
+###
+### Identify data source directory and file
+## DataDir <- ("../data/")
+## DataFile <- ("dailyviews2020032600.tsv")
+
+## related.searches.top <- read.table(paste(DataDir,DataFile, sep=""),
+##                                   sep="\t", header=TRUE,
+##                                   stringsAsFactors=FALSE)
+
+### Cleanup and do the grouping with functions from the Tidyverse
+### (see https://www.tidyverse.org for more info)
+
+views <- views[,c("article", "project", "timestamp", "views")]
+views$timestamp <- factor(views$timestamp)
+
+### Sorts and groups at the same time
+views.by.proj.date <- arrange(group_by(views, project, timestamp),
+                        desc(views))
+
+### Export just the top 10 by pageviews
+write.table(head(views.by.proj.date, 10),
+            file="output/top10_views_by_project_date.csv", sep=",",
+            row.names=FALSE)
+
+### A simple visualization
+p <- ggplot(data=views.by.proj.date, aes(views))
+
+## Density plot with log-transformed axis
+p + geom_density() + scale_x_log10(labels=comma)
+
+
+

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